Description

Ensembl ID TraesSTA1D03G00405420 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 7900 bases Strand Plus strand
Position 1D : 3693210 - 3701109 RNA binding domain RRM_5 , RRM_1 , RRM_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesSTA1D03G00405420 RRM_5 PF13893 4.2e-09 1
TraesSTA1D03G00405420 RRM_5 PF13893 4.2e-09 2
TraesSTA1D03G00405420 RRM_5 PF13893 4.2e-09 3
TraesSTA1D03G00405420 RRM_5 PF13893 4.2e-09 4
TraesSTA1D03G00405420 RRM_5 PF13893 4.2e-09 5
TraesSTA1D03G00405420 RRM_5 PF13893 4.2e-09 6
TraesSTA1D03G00405420 RRM_1 PF00076 1.6e-16 7
TraesSTA1D03G00405420 RRM_1 PF00076 1.6e-16 8
TraesSTA1D03G00405420 RRM_1 PF00076 1.6e-16 9
TraesSTA1D03G00405420 RRM_1 PF00076 1.6e-16 10
TraesSTA1D03G00405420 RRM_1 PF00076 1.6e-16 11
TraesSTA1D03G00405420 RRM_1 PF00076 1.6e-16 12
TraesSTA1D03G00405420 RRM_2 PF04059 3.9e-49 13
TraesSTA1D03G00405420 RRM_2 PF04059 3.9e-49 14
TraesSTA1D03G00405420 RRM_2 PF04059 3.9e-49 15

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesSTA1D03G00405420.1 3714 935aa TraesSTA1D03G00405420.1
- TraesSTA1D03G00405420.2 3714 935aa TraesSTA1D03G00405420.2
- TraesSTA1D03G00405420.3 3718 935aa TraesSTA1D03G00405420.3

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesSTA1D03G00405420

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesSTA1D03G00405420

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression