Description

Ensembl ID TraesROB_scaffold_003557_01G000500 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 9124 bases Strand Plus strand
Position rob_scaffold_003557 : 153749 - 162872 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesROB_scaffold_003557_01G000500 RNA_pol_Rpb2_1 PF04563 1.7e-32 1
TraesROB_scaffold_003557_01G000500 RNA_pol_Rpb2_3 PF04565 2.1e-14 2
TraesROB_scaffold_003557_01G000500 RNA_pol_Rpb2_7 PF04560 2.9e-27 3
TraesROB_scaffold_003557_01G000500 RNA_pol_Rpb2_2 PF04561 4.7e-07 4
TraesROB_scaffold_003557_01G000500 RNA_pol_Rpb2_6 PF00562 1.7e-98 5
TraesROB_scaffold_003557_01G000500 RNA_pol_Rpb2_4 PF04566 1.8e-17 6
TraesROB_scaffold_003557_01G000500 RNA_pol_Rpb2_5 PF04567 3.3e-06 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesROB_scaffold_003557_01G000500.1 3708 1235aa TraesROB_scaffold_003557_01G000500.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesROB_scaffold_003557_01G000500

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesROB_scaffold_003557_01G000500

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression