Description

Ensembl ID TraesLDM1A03G00079600 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 12966 bases Strand Plus strand
Position 1A : 288493366 - 288506331 RNA binding domain ResIII , DEAD , dsrm , Ribonucleas_3_3 , PAZ , Dicer_dimer , Ribonuclease_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesLDM1A03G00079600 ResIII PF04851 3.8e-11 1
TraesLDM1A03G00079600 DEAD PF00270 2.1e-15 2
TraesLDM1A03G00079600 dsrm PF00035 8e-07 3
TraesLDM1A03G00079600 Ribonucleas_3_3 PF14622 1.1e-21 4
TraesLDM1A03G00079600 PAZ PF02170 1.1e-11 5
TraesLDM1A03G00079600 Dicer_dimer PF03368 4.8e-26 6
TraesLDM1A03G00079600 Ribonuclease_3 PF00636 5e-44 7
TraesLDM1A03G00079600 Ribonuclease_3 PF00636 5e-44 8

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesLDM1A03G00079600.1 5949 1627aa TraesLDM1A03G00079600.1

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesLDM1A03G00079600

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesLDM1A03G00079600

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression