RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	TraesKAR6B01G0051200	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1979 bases	Strand	Plus strand
Position	6B : 75314183 - 75316161	RNA binding domain	CSD , zf-CCHC
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
cds	CSD	PF00313	7.5e-27	1
cds	zf-CCHC	PF00098	9.4e-18	2
cds	zf-CCHC	PF00098	9.4e-18	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	TraesKAR6B01G0051200.1	1766	186aa	cds.TraesKAR6B01G0051200.1

Gene Model

Click here to download TraesKAR6B01G0051200's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download TraesKAR6B01G0051200's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TraesKAR6B01G0051200

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TraesKAR6B01G0051200

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression