RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	TraesKAR5B01G0358200	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3296 bases	Strand	Minus strand
Position	5B : 561434670 - 561437965	RNA binding domain	Beta-Casp , CPSF73-100_C , RMMBL
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
cds	Beta-Casp	PF10996	2e-26	1
cds	CPSF73-100_C	PF11718	5e-48	2
cds	RMMBL	PF07521	3.5e-12	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	TraesKAR5B01G0358200.1	2373	587aa	cds.TraesKAR5B01G0358200.1

Gene Model

Click here to download TraesKAR5B01G0358200's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download TraesKAR5B01G0358200's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TraesKAR5B01G0358200

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TraesKAR5B01G0358200

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression