RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	TraesKAR5A01G0210670	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4627 bases	Strand	Plus strand
Position	5A : 352163075 - 352167701	RNA binding domain	EST1 , EST1_DNA_bind
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
cds	EST1	PF10374	1.8e-23	1
cds	EST1_DNA_bind	PF10373	6.9e-66	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	TraesKAR5A01G0210670.1	3102	1033aa	cds.TraesKAR5A01G0210670.1

Gene Model

Click here to download TraesKAR5A01G0210670's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download TraesKAR5A01G0210670's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TraesKAR5A01G0210670

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TraesKAR5A01G0210670

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression