| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | TraesKAR1D01G0161700 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
12182 bases |
Strand |
Plus strand |
| Position |
1D : 228083201 - 228095382 |
RNA binding domain |
ResIII , DEAD , dsrm , Ribonucleas_3_3 , PAZ , Dicer_dimer , Ribonuclease_3 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| cds |
ResIII |
PF04851 |
1.6e-11 |
1 |
| cds |
DEAD |
PF00270 |
6.3e-16 |
2 |
| cds |
dsrm |
PF00035 |
3.7e-07 |
3 |
| cds |
Ribonucleas_3_3 |
PF14622 |
7.1e-22 |
4 |
| cds |
PAZ |
PF02170 |
3.7e-11 |
5 |
| cds |
Dicer_dimer |
PF03368 |
1.5e-25 |
6 |
| cds |
Ribonuclease_3 |
PF00636 |
3e-44 |
7 |
| cds |
Ribonuclease_3 |
PF00636 |
3e-44 |
8 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
TraesKAR1D01G0161700.1 |
5056 |
1628aa |
cds.TraesKAR1D01G0161700.1 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| TraesKAR1D01G0161700 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| TraesKAR1D01G0161700 | | | | | | | | |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |