Description

Ensembl ID TraesJAG2D03G01257880 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 8348 bases Strand Minus strand
Position 2D : 557499831 - 557508178 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesJAG2D03G01257880 RNA_pol_Rpb1_4 PF05000 4.7e-39 1
TraesJAG2D03G01257880 RNA_pol_Rpb1_4 PF05000 4.8e-39 2
TraesJAG2D03G01257880 RNA_pol_Rpb1_1 PF04997 5.3e-108 3
TraesJAG2D03G01257880 RNA_pol_Rpb1_1 PF04997 1.5e-102 4
TraesJAG2D03G01257880 RNA_pol_Rpb1_5 PF04998 4.3e-104 5
TraesJAG2D03G01257880 RNA_pol_Rpb1_5 PF04998 4.4e-104 6
TraesJAG2D03G01257880 RNA_pol_Rpb1_2 PF00623 1.3e-71 7
TraesJAG2D03G01257880 RNA_pol_Rpb1_2 PF00623 1.4e-71 8
TraesJAG2D03G01257880 RNA_pol_Rpb1_3 PF04983 8.4e-46 9
TraesJAG2D03G01257880 RNA_pol_Rpb1_3 PF04983 8.7e-46 10
TraesJAG2D03G01257880 RNA_pol_Rpb1_6 PF04992 3e-62 11
TraesJAG2D03G01257880 RNA_pol_Rpb1_6 PF04992 3.1e-62 12
TraesJAG2D03G01257880 RNA_pol_Rpb1_7 PF04990 5.6e-48 13
TraesJAG2D03G01257880 RNA_pol_Rpb1_7 PF04990 5.7e-48 14

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesJAG2D03G01257880.1 5982 1471aa TraesJAG2D03G01257880.1
- TraesJAG2D03G01257880.2 6146 1453aa TraesJAG2D03G01257880.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesJAG2D03G01257880

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesJAG2D03G01257880

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression