Description

Ensembl ID TraesJAG1D03G00486150 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 10392 bases Strand Minus strand
Position 1D : 260291149 - 260301540 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesJAG1D03G00486150 RRM_1 PF00076 3.3e-10 1
TraesJAG1D03G00486150 RRM_1 PF00076 3.9e-10 2
TraesJAG1D03G00486150 Surp PF01805 1.3e-13 3
TraesJAG1D03G00486150 Surp PF01805 1.7e-13 4
TraesJAG1D03G00486150 cwf21 PF08312 6.6e-07 5
TraesJAG1D03G00486150 cwf21 PF08312 7.7e-07 6
TraesJAG1D03G00486150 CID PF04818 1.6e-07 7
TraesJAG1D03G00486150 CID PF04818 1.9e-07 8

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesJAG1D03G00486150.1 3869 949aa TraesJAG1D03G00486150.1
- TraesJAG1D03G00486150.2 3823 832aa TraesJAG1D03G00486150.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesJAG1D03G00486150

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesJAG1D03G00486150

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression