Description

Ensembl ID TraesJAG1B03G00286410 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 11446 bases Strand Minus strand
Position 1B : 359041860 - 359053305 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesJAG1B03G00286410 RRM_1 PF00076 3.4e-10 1
TraesJAG1B03G00286410 RRM_1 PF00076 3.9e-10 2
TraesJAG1B03G00286410 RRM_1 PF00076 3.9e-10 3
TraesJAG1B03G00286410 RRM_1 PF00076 3.9e-10 4
TraesJAG1B03G00286410 Surp PF01805 7.5e-14 5
TraesJAG1B03G00286410 Surp PF01805 9.5e-14 6
TraesJAG1B03G00286410 Surp PF01805 9.7e-14 7
TraesJAG1B03G00286410 Surp PF01805 9.7e-14 8
TraesJAG1B03G00286410 cwf21 PF08312 6.6e-07 9
TraesJAG1B03G00286410 cwf21 PF08312 7.6e-07 10
TraesJAG1B03G00286410 cwf21 PF08312 7.7e-07 11
TraesJAG1B03G00286410 cwf21 PF08312 7.7e-07 12
TraesJAG1B03G00286410 CID PF04818 1.7e-07 13
TraesJAG1B03G00286410 CID PF04818 2e-07 14
TraesJAG1B03G00286410 CID PF04818 2e-07 15
TraesJAG1B03G00286410 CID PF04818 2e-07 16

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesJAG1B03G00286410.3 4105 935aa TraesJAG1B03G00286410.3
- TraesJAG1B03G00286410.2 4104 948aa TraesJAG1B03G00286410.2
- TraesJAG1B03G00286410.4 4061 832aa TraesJAG1B03G00286410.4
- TraesJAG1B03G00286410.1 4107 949aa TraesJAG1B03G00286410.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesJAG1B03G00286410

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesJAG1B03G00286410

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression