Description

Ensembl ID TraesCS6A02G148500 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 8579 bases Strand Plus strand
Position 6A : 129737336 - 129745914 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCS6A02G148500 RRM_1 PF00076 2.1e-10 1
TraesCS6A02G148500 RRM_1 PF00076 2.3e-10 2
TraesCS6A02G148500 RRM_1 PF00076 2.3e-10 3
TraesCS6A02G148500 Surp PF01805 4.1e-13 4
TraesCS6A02G148500 Surp PF01805 4.5e-13 5
TraesCS6A02G148500 Surp PF01805 5.8e-13 6
TraesCS6A02G148500 cwf21 PF08312 1.3e-08 7
TraesCS6A02G148500 cwf21 PF08312 1.5e-08 8
TraesCS6A02G148500 cwf21 PF08312 1.5e-08 9
TraesCS6A02G148500 CID PF04818 2.9e-07 10
TraesCS6A02G148500 CID PF04818 2.9e-07 11
TraesCS6A02G148500 CID PF04818 3.2e-07 12

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCS6A02G148500.3 2852 857aa TraesCS6A02G148500.3
- TraesCS6A02G148500.1 3284 947aa TraesCS6A02G148500.1
- TraesCS6A02G148500.2 3308 955aa TraesCS6A02G148500.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS6A02G148500

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS6A02G148500

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression