| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | TraesCS5A02G453700 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
Cleavage and polyadenylation specificity factor subunit 2 |
| Status |
Confidence |
Length |
6966 bases |
Strand |
Minus strand |
| Position |
5A : 635269596 - 635276561 |
RNA binding domain |
Lactamase_B , Beta-Casp , RMMBL |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| TraesCS5A02G453700 |
Lactamase_B |
PF00753 |
4.6e-05 |
1 |
| TraesCS5A02G453700 |
Lactamase_B |
PF00753 |
0.0001 |
2 |
| TraesCS5A02G453700 |
Lactamase_B |
PF00753 |
0.00011 |
3 |
| TraesCS5A02G453700 |
Lactamase_B |
PF00753 |
0.00012 |
4 |
| TraesCS5A02G453700 |
Beta-Casp |
PF10996 |
2.2e-20 |
5 |
| TraesCS5A02G453700 |
Beta-Casp |
PF10996 |
5.1e-19 |
6 |
| TraesCS5A02G453700 |
Beta-Casp |
PF10996 |
5.1e-19 |
7 |
| TraesCS5A02G453700 |
Beta-Casp |
PF10996 |
6.5e-19 |
8 |
| TraesCS5A02G453700 |
Beta-Casp |
PF10996 |
6.5e-19 |
9 |
| TraesCS5A02G453700 |
Beta-Casp |
PF10996 |
6.5e-19 |
10 |
| TraesCS5A02G453700 |
RMMBL |
PF07521 |
2.6e-12 |
11 |
| TraesCS5A02G453700 |
RMMBL |
PF07521 |
2.6e-12 |
12 |
| TraesCS5A02G453700 |
RMMBL |
PF07521 |
2.8e-12 |
13 |
| TraesCS5A02G453700 |
RMMBL |
PF07521 |
2.8e-12 |
14 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
TraesCS5A02G453700.4 |
2668 |
738aa |
TraesCS5A02G453700.4 |
| - |
TraesCS5A02G453700.5 |
2671 |
739aa |
TraesCS5A02G453700.5 |
| - |
TraesCS5A02G453700.2 |
2503 |
683aa |
TraesCS5A02G453700.2 |
| - |
TraesCS5A02G453700.3 |
2506 |
684aa |
TraesCS5A02G453700.3 |
| - |
TraesCS5A02G453700.1 |
2638 |
728aa |
TraesCS5A02G453700.1 |
| - |
TraesCS5A02G453700.6 |
1533 |
468aa |
TraesCS5A02G453700.6 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| TraesCS5A02G453700 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| TraesCS5A02G453700 | | | | | | | | |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |