Description

Ensembl ID TraesCS4D02G143800 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 5326 bases Strand Plus strand
Position 4D : 131372330 - 131377655 RNA binding domain POPLD , POP1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCS4D02G143800 POPLD PF08170 1.9e-16 1
TraesCS4D02G143800 POPLD PF08170 1.9e-16 2
TraesCS4D02G143800 POPLD PF08170 4.3e-06 3
TraesCS4D02G143800 POP1 PF06978 7.9e-13 4
TraesCS4D02G143800 POP1 PF06978 2.4e-12 5
TraesCS4D02G143800 POP1 PF06978 2.4e-12 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCS4D02G143800.3 2987 842aa TraesCS4D02G143800.3
- TraesCS4D02G143800.1 2013 533aa TraesCS4D02G143800.1
- TraesCS4D02G143800.2 3152 838aa TraesCS4D02G143800.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS4D02G143800

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS4D02G143800

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression