Description

Ensembl ID TraesCS4A02G171400 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 5456 bases Strand Minus strand
Position 4A : 434077994 - 434083449 RNA binding domain POPLD , POP1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCS4A02G171400 POPLD PF08170 2e-16 1
TraesCS4A02G171400 POPLD PF08170 2e-16 2
TraesCS4A02G171400 POPLD PF08170 4.4e-06 3
TraesCS4A02G171400 POP1 PF06978 3.8e-13 4
TraesCS4A02G171400 POP1 PF06978 1.2e-12 5
TraesCS4A02G171400 POP1 PF06978 1.2e-12 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCS4A02G171400.1 3228 842aa TraesCS4A02G171400.1
- TraesCS4A02G171400.3 1992 533aa TraesCS4A02G171400.3
- TraesCS4A02G171400.2 3216 838aa TraesCS4A02G171400.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS4A02G171400

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS4A02G171400

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression