Description

Ensembl ID TraesCS3D02G205700 Gene ID Accession -
Symbol Alias - Full Name ARM repeat superfamily protein
Status Confidence Length 24310 bases Strand Plus strand
Position 3D : 264696256 - 264720565 RNA binding domain Exportin-5 , Xpo1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCS3D02G205700 Exportin-5 PF19273 0 1
TraesCS3D02G205700 Exportin-5 PF19273 0 2
TraesCS3D02G205700 Exportin-5 PF19273 0 3
TraesCS3D02G205700 Exportin-5 PF19273 3e-292 4
TraesCS3D02G205700 Exportin-5 PF19273 7.7e-292 5
TraesCS3D02G205700 Exportin-5 PF19273 4.6e-286 6
TraesCS3D02G205700 Exportin-5 PF19273 5.7e-286 7
TraesCS3D02G205700 Exportin-5 PF19273 1.6e-285 8
TraesCS3D02G205700 Exportin-5 PF19273 2.6e-285 9
TraesCS3D02G205700 Exportin-5 PF19273 1.2e-284 10
TraesCS3D02G205700 Exportin-5 PF19273 1.2e-284 11
TraesCS3D02G205700 Exportin-5 PF19273 2.5e-284 12
TraesCS3D02G205700 Exportin-5 PF19273 2.5e-284 13
TraesCS3D02G205700 Exportin-5 PF19273 3.1e-284 14
TraesCS3D02G205700 Exportin-5 PF19273 3.1e-284 15
TraesCS3D02G205700 Xpo1 PF08389 1.2e-22 16
TraesCS3D02G205700 Xpo1 PF08389 1.2e-22 17
TraesCS3D02G205700 Xpo1 PF08389 1.3e-22 18
TraesCS3D02G205700 Xpo1 PF08389 1.4e-22 19
TraesCS3D02G205700 Xpo1 PF08389 1.4e-22 20
TraesCS3D02G205700 Xpo1 PF08389 1.4e-22 21
TraesCS3D02G205700 Xpo1 PF08389 1.5e-22 22
TraesCS3D02G205700 Xpo1 PF08389 1.5e-22 23
TraesCS3D02G205700 Xpo1 PF08389 1.7e-22 24
TraesCS3D02G205700 Xpo1 PF08389 1.7e-22 25
TraesCS3D02G205700 Xpo1 PF08389 1.8e-22 26

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCS3D02G205700.12 2523 840aa TraesCS3D02G205700.12
- TraesCS3D02G205700.5 4181 1172aa TraesCS3D02G205700.5
- TraesCS3D02G205700.2 3739 1121aa TraesCS3D02G205700.2
- TraesCS3D02G205700.4 4212 1170aa TraesCS3D02G205700.4
- TraesCS3D02G205700.10 4220 1185aa TraesCS3D02G205700.10
- TraesCS3D02G205700.7 4175 1170aa TraesCS3D02G205700.7
- TraesCS3D02G205700.1 3745 1123aa TraesCS3D02G205700.1
- TraesCS3D02G205700.11 4214 1183aa TraesCS3D02G205700.11
- TraesCS3D02G205700.3 3736 1120aa TraesCS3D02G205700.3
- TraesCS3D02G205700.8 4259 1198aa TraesCS3D02G205700.8
- TraesCS3D02G205700.6 4169 1168aa TraesCS3D02G205700.6
- TraesCS3D02G205700.9 4265 1200aa TraesCS3D02G205700.9

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS3D02G205700

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS3D02G205700

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression