Description

Ensembl ID TraesCS3D02G004500 Gene ID Accession -
Symbol Alias - Full Name Protein decapping 5
Status Confidence Length 5969 bases Strand Minus strand
Position 3D : 1765787 - 1771755 RNA binding domain LSM14 , SM-ATX , FDF
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCS3D02G004500 LSM14 PF12701 7.1e-30 1
TraesCS3D02G004500 SM-ATX PF14438 6.5e-09 2
TraesCS3D02G004500 FDF PF09532 5.6e-15 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCS3D02G004500.1 2392 664aa TraesCS3D02G004500.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS3D02G004500

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS3D02G004500

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression