Description

Ensembl ID TraesCS2B02G270500 Gene ID Accession -
Symbol Alias - Full Name Proline--tRNA ligase, chloroplastic/mitochondrial
Status Confidence Length 8298 bases Strand Minus strand
Position 2B : 368972606 - 368980903 RNA binding domain ProRS-C_1 , HGTP_anticodon , tRNA-synt_2b
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCS2B02G270500 ProRS-C_1 PF09180 6.2e-18 1
TraesCS2B02G270500 ProRS-C_1 PF09180 8.8e-18 2
TraesCS2B02G270500 HGTP_anticodon PF03129 1.9e-13 3
TraesCS2B02G270500 HGTP_anticodon PF03129 2.8e-13 4
TraesCS2B02G270500 tRNA-synt_2b PF00587 5.4e-19 5
TraesCS2B02G270500 tRNA-synt_2b PF00587 8.5e-19 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCS2B02G270500.1 1896 541aa TraesCS2B02G270500.1
- TraesCS2B02G270500.2 1522 434aa TraesCS2B02G270500.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS2B02G270500

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS2B02G270500

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression