Description

Ensembl ID TraesCS1D02G190900 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 10507 bases Strand Minus strand
Position 1D : 262705505 - 262716011 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCS1D02G190900 RRM_1 PF00076 2.7e-10 1
TraesCS1D02G190900 RRM_1 PF00076 3.2e-10 2
TraesCS1D02G190900 RRM_1 PF00076 3.2e-10 3
TraesCS1D02G190900 RRM_1 PF00076 3.2e-10 4
TraesCS1D02G190900 RRM_1 PF00076 4.4e-09 5
TraesCS1D02G190900 Surp PF01805 9.7e-14 6
TraesCS1D02G190900 Surp PF01805 1.1e-13 7
TraesCS1D02G190900 Surp PF01805 1.3e-13 8
TraesCS1D02G190900 Surp PF01805 1.4e-13 9
TraesCS1D02G190900 Surp PF01805 1.4e-13 10
TraesCS1D02G190900 cwf21 PF08312 5.5e-07 11
TraesCS1D02G190900 cwf21 PF08312 6.3e-07 12
TraesCS1D02G190900 cwf21 PF08312 6.4e-07 13
TraesCS1D02G190900 cwf21 PF08312 6.4e-07 14
TraesCS1D02G190900 CID PF04818 1.4e-07 15
TraesCS1D02G190900 CID PF04818 1.4e-07 16
TraesCS1D02G190900 CID PF04818 1.6e-07 17
TraesCS1D02G190900 CID PF04818 1.6e-07 18
TraesCS1D02G190900 CID PF04818 1.6e-07 19

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCS1D02G190900.5 2431 805aa TraesCS1D02G190900.5
- TraesCS1D02G190900.4 3984 949aa TraesCS1D02G190900.4
- TraesCS1D02G190900.1 3412 839aa TraesCS1D02G190900.1
- TraesCS1D02G190900.3 3752 948aa TraesCS1D02G190900.3
- TraesCS1D02G190900.2 3753 935aa TraesCS1D02G190900.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS1D02G190900

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS1D02G190900

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression