Description

Ensembl ID TraesCS1D02G151300 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 10191 bases Strand Minus strand
Position 1D : 209509948 - 209520138 RNA binding domain Piwi , PAZ
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCS1D02G151300 Piwi PF02171 2.3e-96 1
TraesCS1D02G151300 Piwi PF02171 3.5e-96 2
TraesCS1D02G151300 Piwi PF02171 3.6e-96 3
TraesCS1D02G151300 Piwi PF02171 8.8e-92 4
TraesCS1D02G151300 Piwi PF02171 2e-88 5
TraesCS1D02G151300 Piwi PF02171 8.1e-83 6
TraesCS1D02G151300 Piwi PF02171 1.6e-82 7
TraesCS1D02G151300 Piwi PF02171 7.3e-45 8
TraesCS1D02G151300 Piwi PF02171 2.1e-24 9
TraesCS1D02G151300 PAZ PF02170 2e-12 10
TraesCS1D02G151300 PAZ PF02170 2.1e-12 11
TraesCS1D02G151300 PAZ PF02170 2.6e-12 12
TraesCS1D02G151300 PAZ PF02170 2.7e-12 13
TraesCS1D02G151300 PAZ PF02170 2.7e-12 14
TraesCS1D02G151300 PAZ PF02170 2.8e-12 15
TraesCS1D02G151300 PAZ PF02170 2.8e-12 16
TraesCS1D02G151300 PAZ PF02170 7.8e-10 17
TraesCS1D02G151300 PAZ PF02170 8.3e-10 18

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCS1D02G151300.5 3104 830aa TraesCS1D02G151300.5
- TraesCS1D02G151300.7 2779 808aa TraesCS1D02G151300.7
- TraesCS1D02G151300.4 3137 841aa TraesCS1D02G151300.4
- TraesCS1D02G151300.6 3134 840aa TraesCS1D02G151300.6
- TraesCS1D02G151300.2 2284 674aa TraesCS1D02G151300.2
- TraesCS1D02G151300.3 3161 849aa TraesCS1D02G151300.3
- TraesCS1D02G151300.1 2227 655aa TraesCS1D02G151300.1
- TraesCS1D02G151300.9 2131 592aa TraesCS1D02G151300.9
- TraesCS1D02G151300.8 3065 821aa TraesCS1D02G151300.8

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS1D02G151300

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS1D02G151300

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression