RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | TraesCS1D02G108700 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
DNA-directed RNA polymerase subunit |
Status |
Confidence |
Length |
11386 bases |
Strand |
Minus strand |
Position |
1D : 101281795 - 101293180 |
RNA binding domain |
RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
TraesCS1D02G108700 |
RNA_pol_Rpb1_4 |
PF05000 |
2.8e-10 |
1 |
TraesCS1D02G108700 |
RNA_pol_Rpb1_4 |
PF05000 |
2.8e-10 |
2 |
TraesCS1D02G108700 |
RNA_pol_Rpb1_4 |
PF05000 |
2.8e-10 |
3 |
TraesCS1D02G108700 |
RNA_pol_Rpb1_1 |
PF04997 |
1.6e-10 |
4 |
TraesCS1D02G108700 |
RNA_pol_Rpb1_1 |
PF04997 |
2.1e-10 |
5 |
TraesCS1D02G108700 |
RNA_pol_Rpb1_1 |
PF04997 |
2.2e-10 |
6 |
TraesCS1D02G108700 |
RNA_pol_Rpb1_2 |
PF00623 |
8.6e-28 |
7 |
TraesCS1D02G108700 |
RNA_pol_Rpb1_2 |
PF00623 |
9.2e-28 |
8 |
TraesCS1D02G108700 |
RNA_pol_Rpb1_2 |
PF00623 |
9.3e-28 |
9 |
TraesCS1D02G108700 |
RNA_pol_Rpb1_3 |
PF04983 |
7.4e-20 |
10 |
TraesCS1D02G108700 |
RNA_pol_Rpb1_3 |
PF04983 |
8.2e-20 |
11 |
TraesCS1D02G108700 |
RNA_pol_Rpb1_3 |
PF04983 |
8.2e-20 |
12 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
TraesCS1D02G108700.2 |
4755 |
1414aa |
TraesCS1D02G108700.2 |
- |
TraesCS1D02G108700.1 |
4788 |
1425aa |
TraesCS1D02G108700.1 |
- |
TraesCS1D02G108700.3 |
4785 |
1424aa |
TraesCS1D02G108700.3 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
TraesCS1D02G108700 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
TraesCS1D02G108700 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |