Description

Ensembl ID TraesCS1B02G193700 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 11333 bases Strand Minus strand
Position 1B : 348795726 - 348807058 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCS1B02G193700 RRM_1 PF00076 3.2e-10 1
TraesCS1B02G193700 RRM_1 PF00076 3.2e-10 2
TraesCS1B02G193700 RRM_1 PF00076 3.2e-10 3
TraesCS1B02G193700 Surp PF01805 7.9e-14 4
TraesCS1B02G193700 Surp PF01805 8.1e-14 5
TraesCS1B02G193700 Surp PF01805 8.1e-14 6
TraesCS1B02G193700 cwf21 PF08312 6.3e-07 7
TraesCS1B02G193700 cwf21 PF08312 6.4e-07 8
TraesCS1B02G193700 cwf21 PF08312 6.4e-07 9
TraesCS1B02G193700 CID PF04818 1.6e-07 10
TraesCS1B02G193700 CID PF04818 1.6e-07 11
TraesCS1B02G193700 CID PF04818 1.6e-07 12

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCS1B02G193700.2 3992 935aa TraesCS1B02G193700.2
- TraesCS1B02G193700.3 3991 948aa TraesCS1B02G193700.3
- TraesCS1B02G193700.1 3994 949aa TraesCS1B02G193700.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS1B02G193700

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS1B02G193700

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression