Description

Ensembl ID TraesCS1A02G107800 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 10872 bases Strand Minus strand
Position 1A : 106219615 - 106230486 RNA binding domain tRNA-synt_1d , Arg_tRNA_synt_N , DALR_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCS1A02G107800 tRNA-synt_1d PF00750 1.6e-117 1
TraesCS1A02G107800 tRNA-synt_1d PF00750 2.3e-117 2
TraesCS1A02G107800 tRNA-synt_1d PF00750 2.3e-117 3
TraesCS1A02G107800 tRNA-synt_1d PF00750 5.2e-115 4
TraesCS1A02G107800 Arg_tRNA_synt_N PF03485 9.2e-17 5
TraesCS1A02G107800 Arg_tRNA_synt_N PF03485 9.8e-17 6
TraesCS1A02G107800 Arg_tRNA_synt_N PF03485 1.1e-16 7
TraesCS1A02G107800 Arg_tRNA_synt_N PF03485 1.2e-16 8
TraesCS1A02G107800 DALR_1 PF05746 3e-28 9
TraesCS1A02G107800 DALR_1 PF05746 3.5e-28 10
TraesCS1A02G107800 DALR_1 PF05746 3.5e-28 11
TraesCS1A02G107800 DALR_1 PF05746 2.5e-17 12

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCS1A02G107800.4 2381 659aa TraesCS1A02G107800.4
- TraesCS1A02G107800.1 2390 662aa TraesCS1A02G107800.1
- TraesCS1A02G107800.3 2125 597aa TraesCS1A02G107800.3
- TraesCS1A02G107800.2 2083 583aa TraesCS1A02G107800.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS1A02G107800

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS1A02G107800

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression