Description

Ensembl ID TraesCS1A02G106300 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase subunit
Status Confidence Length 11173 bases Strand Plus strand
Position 1A : 104208687 - 104219859 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCS1A02G106300 RNA_pol_Rpb1_4 PF05000 1.6e-10 1
TraesCS1A02G106300 RNA_pol_Rpb1_4 PF05000 2.7e-10 2
TraesCS1A02G106300 RNA_pol_Rpb1_1 PF04997 1.3e-10 3
TraesCS1A02G106300 RNA_pol_Rpb1_2 PF00623 2.6e-28 4
TraesCS1A02G106300 RNA_pol_Rpb1_2 PF00623 3.5e-28 5
TraesCS1A02G106300 RNA_pol_Rpb1_3 PF04983 6.5e-20 6
TraesCS1A02G106300 RNA_pol_Rpb1_3 PF04983 1.1e-19 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCS1A02G106300.1 4622 1425aa TraesCS1A02G106300.1
- TraesCS1A02G106300.2 2721 906aa TraesCS1A02G106300.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS1A02G106300

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCS1A02G106300

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression