Description

Ensembl ID TraesCLE_scaffold_051120_01G000100 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 12231 bases Strand Plus strand
Position cle_scaffold_051120 : 43428 - 55658 RNA binding domain ResIII , DEAD , DND1_DSRM , dsrm , Ribonucleas_3_3 , PAZ , Dicer_dimer , Ribonuclease_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesCLE_scaffold_051120_01G000100 ResIII PF04851 7.8e-13 1
TraesCLE_scaffold_051120_01G000100 DEAD PF00270 6.4e-13 2
TraesCLE_scaffold_051120_01G000100 DND1_DSRM PF14709 7.1e-15 3
TraesCLE_scaffold_051120_01G000100 dsrm PF00035 7e-17 4
TraesCLE_scaffold_051120_01G000100 Ribonucleas_3_3 PF14622 6.6e-24 5
TraesCLE_scaffold_051120_01G000100 PAZ PF02170 2.8e-25 6
TraesCLE_scaffold_051120_01G000100 Dicer_dimer PF03368 5.1e-22 7
TraesCLE_scaffold_051120_01G000100 Ribonuclease_3 PF00636 9.5e-55 8
TraesCLE_scaffold_051120_01G000100 Ribonuclease_3 PF00636 9.5e-55 9

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesCLE_scaffold_051120_01G000100.1 6075 2024aa TraesCLE_scaffold_051120_01G000100.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCLE_scaffold_051120_01G000100

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesCLE_scaffold_051120_01G000100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression