Description

Ensembl ID TraesARI2D03G01268330 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 8565 bases Strand Minus strand
Position 2D : 540821181 - 540829745 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesARI2D03G01268330 RNA_pol_Rpb1_4 PF05000 4.9e-39 1
TraesARI2D03G01268330 RNA_pol_Rpb1_4 PF05000 5e-39 2
TraesARI2D03G01268330 RNA_pol_Rpb1_1 PF04997 5.6e-108 3
TraesARI2D03G01268330 RNA_pol_Rpb1_1 PF04997 1.6e-102 4
TraesARI2D03G01268330 RNA_pol_Rpb1_5 PF04998 4.5e-104 5
TraesARI2D03G01268330 RNA_pol_Rpb1_5 PF04998 4.6e-104 6
TraesARI2D03G01268330 RNA_pol_Rpb1_2 PF00623 1.4e-71 7
TraesARI2D03G01268330 RNA_pol_Rpb1_2 PF00623 1.5e-71 8
TraesARI2D03G01268330 RNA_pol_Rpb1_3 PF04983 8.8e-46 9
TraesARI2D03G01268330 RNA_pol_Rpb1_3 PF04983 9.1e-46 10
TraesARI2D03G01268330 RNA_pol_Rpb1_6 PF04992 3.2e-62 11
TraesARI2D03G01268330 RNA_pol_Rpb1_6 PF04992 3.2e-62 12
TraesARI2D03G01268330 RNA_pol_Rpb1_7 PF04990 5.8e-48 13
TraesARI2D03G01268330 RNA_pol_Rpb1_7 PF04990 5.9e-48 14

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesARI2D03G01268330.1 6199 1471aa TraesARI2D03G01268330.1
- TraesARI2D03G01268330.2 6363 1453aa TraesARI2D03G01268330.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesARI2D03G01268330

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesARI2D03G01268330

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression