RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	Tp57577_TGAC_v2_gene24949	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Tyrosine--tRNA ligase, chloroplastic/mitochondrial
Status	Confidence	Length	1 bases	Strand
Position	: 0 - 0	RNA binding domain	tRNA-synt_1b
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Tp57577_TGAC_v2_mRNA25803	tRNA-synt_1b	PF00579	1.9e-75	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Tp57577_TGAC_v2_mRNA25803	1935	496aa	Tp57577_TGAC_v2_mRNA25803

Gene Model

Click here to download Tp57577_TGAC_v2_gene24949's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Tp57577_TGAC_v2_gene24949's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Tp57577_TGAC_v2_gene24949

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Tp57577_TGAC_v2_gene24949

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression