Description

Ensembl ID Tc08v2_g008670 Gene ID Accession -
Symbol Alias - Full Name Serine--tRNA ligase, chloroplastic/mitochondrial
Status Confidence Length 3633 bases Strand Minus strand
Position VIII : 5026681 - 5030313 RNA binding domain Seryl_tRNA_N , tRNA-synt_2b
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Tc08v2_p008670 Seryl_tRNA_N PF02403 5.8e-19 1
Tc08v2_p008670 Seryl_tRNA_N PF02403 5.9e-19 2
Tc08v2_p008670 Seryl_tRNA_N PF02403 5.9e-19 3
Tc08v2_p008670 tRNA-synt_2b PF00587 3.9e-28 4
Tc08v2_p008670 tRNA-synt_2b PF00587 5.2e-25 5
Tc08v2_p008670 tRNA-synt_2b PF00587 5.6e-19 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Tc08v2_t008670.3 2054 531aa Tc08v2_p008670.3
- Tc08v2_t008670.2 2030 523aa Tc08v2_p008670.2
- Tc08v2_t008670.1 2025 513aa Tc08v2_p008670.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Tc08v2_g008670

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Tc08v2_g008670

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression