Description

Ensembl ID Tc05v2_g013740 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase I subunit 1
Status Confidence Length 20734 bases Strand Plus strand
Position V : 27703788 - 27724521 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Tc05v2_p013740 RNA_pol_Rpb1_4 PF05000 1.1e-21 1
Tc05v2_p013740 RNA_pol_Rpb1_4 PF05000 1.2e-21 2
Tc05v2_p013740 RNA_pol_Rpb1_1 PF04997 1e-29 3
Tc05v2_p013740 RNA_pol_Rpb1_1 PF04997 1e-29 4
Tc05v2_p013740 RNA_pol_Rpb1_5 PF04998 2.1e-86 5
Tc05v2_p013740 RNA_pol_Rpb1_5 PF04998 2.3e-86 6
Tc05v2_p013740 RNA_pol_Rpb1_2 PF00623 3.5e-59 7
Tc05v2_p013740 RNA_pol_Rpb1_2 PF00623 3.5e-59 8
Tc05v2_p013740 RNA_pol_Rpb1_3 PF04983 6.5e-33 9
Tc05v2_p013740 RNA_pol_Rpb1_3 PF04983 6.5e-33 10

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Tc05v2_t013740.2 5474 1689aa Tc05v2_p013740.2
- Tc05v2_t013740.1 5483 1692aa Tc05v2_p013740.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Tc05v2_g013740

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Tc05v2_g013740

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression