RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	Tc03v2_g020980	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4
Status	Confidence	Length	2694 bases	Strand	Plus strand
Position	III : 32712912 - 32715605	RNA binding domain	DcpS_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Tc03v2_p020980	DcpS_C	PF11969	3.3e-28	1
Tc03v2_p020980	DcpS_C	PF11969	7.5e-28	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Tc03v2_t020980.2	990	151aa	Tc03v2_p020980.2
-	Tc03v2_t020980.1	891	158aa	Tc03v2_p020980.1

Gene Model

Click here to download Tc03v2_g020980's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Tc03v2_g020980's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Tc03v2_g020980

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Tc03v2_g020980

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression