Description

Ensembl ID Tc02v2_g025380 Gene ID Accession -
Symbol Alias - Full Name Cleavage and polyadenylation specificity factor subunit 3-II
Status Confidence Length 11967 bases Strand Minus strand
Position II : 36555797 - 36567763 RNA binding domain Lactamase_B , Beta-Casp , RMMBL
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Tc02v2_p025380 Lactamase_B PF00753 9.8e-12 1
Tc02v2_p025380 Lactamase_B PF00753 1.1e-11 2
Tc02v2_p025380 Beta-Casp PF10996 3.3e-23 3
Tc02v2_p025380 Beta-Casp PF10996 1.6e-16 4
Tc02v2_p025380 RMMBL PF07521 4.3e-16 5
Tc02v2_p025380 RMMBL PF07521 4.5e-16 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Tc02v2_t025380.1 2155 622aa Tc02v2_p025380.1
- Tc02v2_t025380.2 2260 657aa Tc02v2_p025380.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Tc02v2_g025380

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Tc02v2_g025380

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression