RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	Tc02v2_g002640	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Serine--tRNA ligase, cytoplasmic
Status	Confidence	Length	3283 bases	Strand	Plus strand
Position	II : 1798895 - 1802177	RNA binding domain	Seryl_tRNA_N , tRNA-synt_2b
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Tc02v2_p002640	Seryl_tRNA_N	PF02403	2.8e-25	1
Tc02v2_p002640	tRNA-synt_2b	PF00587	7.3e-37	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Tc02v2_t002640.1	1741	447aa	Tc02v2_p002640.1

Gene Model

Click here to download Tc02v2_g002640's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Tc02v2_g002640's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Tc02v2_g002640

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Tc02v2_g002640

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression