Description

Ensembl ID Tc01v2_g000950 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase subunit
Status Confidence Length 8910 bases Strand Minus strand
Position I : 514272 - 523181 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 , RNA_pol_Rpb1_R , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Tc01v2_p000950 RNA_pol_Rpb1_4 PF05000 7e-40 1
Tc01v2_p000950 RNA_pol_Rpb1_1 PF04997 2.9e-112 2
Tc01v2_p000950 RNA_pol_Rpb1_5 PF04998 1.8e-106 3
Tc01v2_p000950 RNA_pol_Rpb1_2 PF00623 5e-72 4
Tc01v2_p000950 RNA_pol_Rpb1_3 PF04983 1.5e-49 5
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 6
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 7
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 8
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 9
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 10
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 11
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 12
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 13
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 14
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 15
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 16
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 17
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 18
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 19
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 20
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 21
Tc01v2_p000950 RNA_pol_Rpb1_R PF05001 8.9e-20 22
Tc01v2_p000950 RNA_pol_Rpb1_6 PF04992 2.4e-66 23
Tc01v2_p000950 RNA_pol_Rpb1_7 PF04990 1.3e-53 24

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Tc01v2_t000950.1 6196 1861aa Tc01v2_p000950.1

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Tc01v2_g000950

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Tc01v2_g000950

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression