Description

Ensembl ID TRITD6Av1G131520 Gene ID Accession -
Symbol Alias - Full Name Ribosomal RNA small subunit methyltransferase NEP1
Status Confidence Length 3483 bases Strand Minus strand
Position 6A : 381468201 - 381471683 RNA binding domain EMG1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRITD6Av1G131520 EMG1 PF03587 1.1e-72 1
TRITD6Av1G131520 EMG1 PF03587 1.3e-63 2
TRITD6Av1G131520 EMG1 PF03587 1.8e-58 3
TRITD6Av1G131520 EMG1 PF03587 1.8e-56 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRITD6Av1G131520.4 729 242aa TRITD6Av1G131520.4
- TRITD6Av1G131520.1 741 246aa TRITD6Av1G131520.1
- TRITD6Av1G131520.2 789 262aa TRITD6Av1G131520.2
- TRITD6Av1G131520.3 771 256aa TRITD6Av1G131520.3

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD6Av1G131520

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD6Av1G131520

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression