Description

Ensembl ID TRITD6Av1G049020 Gene ID Accession -
Symbol Alias - Full Name Exosome complex component rrp45 G
Status Confidence Length 3797 bases Strand Minus strand
Position 6A : 114107214 - 114111010 RNA binding domain RNase_PH , RNase_PH_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRITD6Av1G049020 RNase_PH PF01138 4.6e-22 1
TRITD6Av1G049020 RNase_PH PF01138 6.4e-22 2
TRITD6Av1G049020 RNase_PH PF01138 9.2e-22 3
TRITD6Av1G049020 RNase_PH PF01138 1.3e-21 4
TRITD6Av1G049020 RNase_PH PF01138 1.6e-21 5
TRITD6Av1G049020 RNase_PH PF01138 2e-10 6
TRITD6Av1G049020 RNase_PH PF01138 1.7e-05 7
TRITD6Av1G049020 RNase_PH_C PF03725 9.3e-13 8
TRITD6Av1G049020 RNase_PH_C PF03725 2.7e-12 9
TRITD6Av1G049020 RNase_PH_C PF03725 3.6e-12 10
TRITD6Av1G049020 RNase_PH_C PF03725 4.2e-12 11
TRITD6Av1G049020 RNase_PH_C PF03725 4.5e-12 12
TRITD6Av1G049020 RNase_PH_C PF03725 5.6e-12 13

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRITD6Av1G049020.6 468 155aa TRITD6Av1G049020.6
- TRITD6Av1G049020.2 1155 384aa TRITD6Av1G049020.2
- TRITD6Av1G049020.1 579 192aa TRITD6Av1G049020.1
- TRITD6Av1G049020.3 1347 448aa TRITD6Av1G049020.3
- TRITD6Av1G049020.7 825 274aa TRITD6Av1G049020.7
- TRITD6Av1G049020.5 1014 337aa TRITD6Av1G049020.5
- TRITD6Av1G049020.8 699 232aa TRITD6Av1G049020.8
- TRITD6Av1G049020.4 1188 395aa TRITD6Av1G049020.4

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD6Av1G049020

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD6Av1G049020

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression