Description

Ensembl ID TRITD5Bv1G192360 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase subunit beta
Status Confidence Length 8005 bases Strand Plus strand
Position 5B : 551302447 - 551310451 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRITD5Bv1G192360 RNA_pol_Rpb2_1 PF04563 2.4e-73 1
TRITD5Bv1G192360 RNA_pol_Rpb2_1 PF04563 2.7e-73 2
TRITD5Bv1G192360 RNA_pol_Rpb2_1 PF04563 8.2e-73 3
TRITD5Bv1G192360 RNA_pol_Rpb2_1 PF04563 2.3e-63 4
TRITD5Bv1G192360 RNA_pol_Rpb2_1 PF04563 5e-63 5
TRITD5Bv1G192360 RNA_pol_Rpb2_1 PF04563 6.4e-63 6
TRITD5Bv1G192360 RNA_pol_Rpb2_1 PF04563 8.2e-61 7
TRITD5Bv1G192360 RNA_pol_Rpb2_1 PF04563 3.6e-09 8
TRITD5Bv1G192360 RNA_pol_Rpb2_1 PF04563 4.8e-09 9
TRITD5Bv1G192360 RNA_pol_Rpb2_3 PF04565 1.3e-25 10
TRITD5Bv1G192360 RNA_pol_Rpb2_3 PF04565 1.4e-25 11
TRITD5Bv1G192360 RNA_pol_Rpb2_3 PF04565 1.5e-25 12
TRITD5Bv1G192360 RNA_pol_Rpb2_3 PF04565 1.5e-25 13
TRITD5Bv1G192360 RNA_pol_Rpb2_3 PF04565 1.6e-25 14
TRITD5Bv1G192360 RNA_pol_Rpb2_3 PF04565 1.7e-25 15
TRITD5Bv1G192360 RNA_pol_Rpb2_3 PF04565 1.7e-25 16
TRITD5Bv1G192360 RNA_pol_Rpb2_3 PF04565 1.8e-25 17
TRITD5Bv1G192360 RNA_pol_Rpb2_3 PF04565 2e-25 18
TRITD5Bv1G192360 RNA_pol_Rpb2_3 PF04565 2.8e-25 19
TRITD5Bv1G192360 RNA_pol_Rpb2_3 PF04565 9.1e-17 20
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 8e-36 21
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 8.1e-36 22
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 8.1e-36 23
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 8.2e-36 24
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 8.2e-36 25
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 1.1e-35 26
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 2.1e-35 27
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 2.2e-35 28
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 2.4e-35 29
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 2.7e-35 30
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 2.8e-35 31
TRITD5Bv1G192360 RNA_pol_Rpb2_7 PF04560 2.8e-35 32
TRITD5Bv1G192360 RNA_pol_Rpb2_2 PF04561 5.8e-57 33
TRITD5Bv1G192360 RNA_pol_Rpb2_2 PF04561 5.8e-57 34
TRITD5Bv1G192360 RNA_pol_Rpb2_2 PF04561 6.7e-57 35
TRITD5Bv1G192360 RNA_pol_Rpb2_2 PF04561 1e-56 36
TRITD5Bv1G192360 RNA_pol_Rpb2_2 PF04561 1.2e-56 37
TRITD5Bv1G192360 RNA_pol_Rpb2_2 PF04561 1.7e-56 38
TRITD5Bv1G192360 RNA_pol_Rpb2_2 PF04561 1.8e-56 39
TRITD5Bv1G192360 RNA_pol_Rpb2_2 PF04561 1.3e-51 40
TRITD5Bv1G192360 RNA_pol_Rpb2_2 PF04561 1.2e-23 41
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 8.1e-126 42
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 8.9e-126 43
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 1.8e-125 44
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 2e-125 45
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 2.6e-125 46
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 2.8e-125 47
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 2.4e-88 48
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 1.8e-80 49
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 1.8e-80 50
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 2.2e-80 51
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 2.3e-80 52
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 5.9e-80 53
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 3.4e-37 54
TRITD5Bv1G192360 RNA_pol_Rpb2_6 PF00562 3.8e-14 55
TRITD5Bv1G192360 RNA_pol_Rpb2_4 PF04566 7.3e-21 56
TRITD5Bv1G192360 RNA_pol_Rpb2_4 PF04566 8.1e-21 57
TRITD5Bv1G192360 RNA_pol_Rpb2_4 PF04566 8.2e-21 58
TRITD5Bv1G192360 RNA_pol_Rpb2_4 PF04566 8.9e-21 59
TRITD5Bv1G192360 RNA_pol_Rpb2_4 PF04566 9.1e-21 60
TRITD5Bv1G192360 RNA_pol_Rpb2_4 PF04566 9.3e-21 61
TRITD5Bv1G192360 RNA_pol_Rpb2_4 PF04566 1.1e-20 62
TRITD5Bv1G192360 RNA_pol_Rpb2_4 PF04566 1.1e-20 63
TRITD5Bv1G192360 RNA_pol_Rpb2_4 PF04566 1.6e-20 64
TRITD5Bv1G192360 RNA_pol_Rpb2_4 PF04566 1.7e-20 65
TRITD5Bv1G192360 RNA_pol_Rpb2_4 PF04566 6.7e-07 66
TRITD5Bv1G192360 RNA_pol_Rpb2_5 PF04567 9.2e-17 67
TRITD5Bv1G192360 RNA_pol_Rpb2_5 PF04567 9.8e-17 68
TRITD5Bv1G192360 RNA_pol_Rpb2_5 PF04567 1.1e-16 69
TRITD5Bv1G192360 RNA_pol_Rpb2_5 PF04567 1.2e-16 70
TRITD5Bv1G192360 RNA_pol_Rpb2_5 PF04567 1.2e-16 71
TRITD5Bv1G192360 RNA_pol_Rpb2_5 PF04567 1.3e-16 72
TRITD5Bv1G192360 RNA_pol_Rpb2_5 PF04567 1.4e-16 73
TRITD5Bv1G192360 RNA_pol_Rpb2_5 PF04567 1.5e-16 74
TRITD5Bv1G192360 RNA_pol_Rpb2_5 PF04567 7.9e-12 75

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRITD5Bv1G192360.13 999 332aa TRITD5Bv1G192360.13
- TRITD5Bv1G192360.17 987 328aa TRITD5Bv1G192360.17
- TRITD5Bv1G192360.14 1002 333aa TRITD5Bv1G192360.14
- TRITD5Bv1G192360.2 2217 738aa TRITD5Bv1G192360.2
- TRITD5Bv1G192360.10 2403 800aa TRITD5Bv1G192360.10
- TRITD5Bv1G192360.5 1635 544aa TRITD5Bv1G192360.5
- TRITD5Bv1G192360.4 3525 1174aa TRITD5Bv1G192360.4
- TRITD5Bv1G192360.16 999 332aa TRITD5Bv1G192360.16
- TRITD5Bv1G192360.6 2247 748aa TRITD5Bv1G192360.6
- TRITD5Bv1G192360.1 2094 697aa TRITD5Bv1G192360.1
- TRITD5Bv1G192360.7 2487 828aa TRITD5Bv1G192360.7
- TRITD5Bv1G192360.15 996 331aa TRITD5Bv1G192360.15
- TRITD5Bv1G192360.3 3666 1221aa TRITD5Bv1G192360.3
- TRITD5Bv1G192360.9 2688 895aa TRITD5Bv1G192360.9
- TRITD5Bv1G192360.11 2301 766aa TRITD5Bv1G192360.11
- TRITD5Bv1G192360.8 2814 937aa TRITD5Bv1G192360.8
- TRITD5Bv1G192360.12 1155 384aa TRITD5Bv1G192360.12

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD5Bv1G192360

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD5Bv1G192360

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression