Description

Ensembl ID TRITD5Bv1G067440 Gene ID Accession -
Symbol Alias - Full Name La protein homolog
Status Confidence Length 17726 bases Strand Plus strand
Position 5B : 195319398 - 195337123 RNA binding domain PAM2 , RRM_1 , La
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRITD5Bv1G067440 PAM2 PF07145 0.00019 1
TRITD5Bv1G067440 PAM2 PF07145 0.00028 2
TRITD5Bv1G067440 PAM2 PF07145 0.00037 3
TRITD5Bv1G067440 PAM2 PF07145 0.00041 4
TRITD5Bv1G067440 RRM_1 PF00076 2.4e-07 5
TRITD5Bv1G067440 RRM_1 PF00076 3.6e-07 6
TRITD5Bv1G067440 RRM_1 PF00076 4.6e-07 7
TRITD5Bv1G067440 La PF05383 1.9e-18 8
TRITD5Bv1G067440 La PF05383 3.1e-18 9
TRITD5Bv1G067440 La PF05383 4.8e-18 10
TRITD5Bv1G067440 La PF05383 5.3e-18 11
TRITD5Bv1G067440 La PF05383 1e-15 12

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRITD5Bv1G067440.8 789 262aa TRITD5Bv1G067440.8
- TRITD5Bv1G067440.7 924 307aa TRITD5Bv1G067440.7
- TRITD5Bv1G067440.4 1347 448aa TRITD5Bv1G067440.4
- TRITD5Bv1G067440.6 390 129aa TRITD5Bv1G067440.6
- TRITD5Bv1G067440.1 1442 479aa TRITD5Bv1G067440.1
- TRITD5Bv1G067440.2 840 279aa TRITD5Bv1G067440.2
- TRITD5Bv1G067440.3 1083 360aa TRITD5Bv1G067440.3
- TRITD5Bv1G067440.5 1203 400aa TRITD5Bv1G067440.5

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD5Bv1G067440

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD5Bv1G067440

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression