Description

Ensembl ID TRITD5Av1G080350 Gene ID Accession -
Symbol Alias - Full Name La protein homolog
Status Confidence Length 9574 bases Strand Plus strand
Position 5A : 227056229 - 227065802 RNA binding domain PAM2 , RRM_1 , La
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRITD5Av1G080350 PAM2 PF07145 0.0002 1
TRITD5Av1G080350 PAM2 PF07145 0.00028 2
TRITD5Av1G080350 PAM2 PF07145 0.00038 3
TRITD5Av1G080350 PAM2 PF07145 0.0004 4
TRITD5Av1G080350 RRM_1 PF00076 2.4e-07 5
TRITD5Av1G080350 RRM_1 PF00076 3.6e-07 6
TRITD5Av1G080350 RRM_1 PF00076 4.6e-07 7
TRITD5Av1G080350 La PF05383 1.9e-18 8
TRITD5Av1G080350 La PF05383 3.1e-18 9
TRITD5Av1G080350 La PF05383 4.6e-18 10
TRITD5Av1G080350 La PF05383 4.9e-18 11
TRITD5Av1G080350 La PF05383 9.7e-16 12

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRITD5Av1G080350.5 1206 401aa TRITD5Av1G080350.5
- TRITD5Av1G080350.8 801 266aa TRITD5Av1G080350.8
- TRITD5Av1G080350.3 1398 465aa TRITD5Av1G080350.3
- TRITD5Av1G080350.6 390 129aa TRITD5Av1G080350.6
- TRITD5Av1G080350.4 1350 449aa TRITD5Av1G080350.4
- TRITD5Av1G080350.1 840 279aa TRITD5Av1G080350.1
- TRITD5Av1G080350.2 1083 360aa TRITD5Av1G080350.2
- TRITD5Av1G080350.7 927 308aa TRITD5Av1G080350.7

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD5Av1G080350

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD5Av1G080350

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression