RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | TRITD5Av1G080350 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
La protein homolog
|
Status |
Confidence |
Length |
9574 bases |
Strand |
Plus strand |
Position |
5A : 227056229 - 227065802 |
RNA binding domain |
PAM2 , RRM_1 , La |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
TRITD5Av1G080350 |
PAM2 |
PF07145 |
0.0002 |
1 |
TRITD5Av1G080350 |
PAM2 |
PF07145 |
0.00028 |
2 |
TRITD5Av1G080350 |
PAM2 |
PF07145 |
0.00038 |
3 |
TRITD5Av1G080350 |
PAM2 |
PF07145 |
0.0004 |
4 |
TRITD5Av1G080350 |
RRM_1 |
PF00076 |
2.4e-07 |
5 |
TRITD5Av1G080350 |
RRM_1 |
PF00076 |
3.6e-07 |
6 |
TRITD5Av1G080350 |
RRM_1 |
PF00076 |
4.6e-07 |
7 |
TRITD5Av1G080350 |
La |
PF05383 |
1.9e-18 |
8 |
TRITD5Av1G080350 |
La |
PF05383 |
3.1e-18 |
9 |
TRITD5Av1G080350 |
La |
PF05383 |
4.6e-18 |
10 |
TRITD5Av1G080350 |
La |
PF05383 |
4.9e-18 |
11 |
TRITD5Av1G080350 |
La |
PF05383 |
9.7e-16 |
12 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
TRITD5Av1G080350.5 |
1206 |
401aa |
TRITD5Av1G080350.5 |
- |
TRITD5Av1G080350.8 |
801 |
266aa |
TRITD5Av1G080350.8 |
- |
TRITD5Av1G080350.3 |
1398 |
465aa |
TRITD5Av1G080350.3 |
- |
TRITD5Av1G080350.6 |
390 |
129aa |
TRITD5Av1G080350.6 |
- |
TRITD5Av1G080350.4 |
1350 |
449aa |
TRITD5Av1G080350.4 |
- |
TRITD5Av1G080350.1 |
840 |
279aa |
TRITD5Av1G080350.1 |
- |
TRITD5Av1G080350.2 |
1083 |
360aa |
TRITD5Av1G080350.2 |
- |
TRITD5Av1G080350.7 |
927 |
308aa |
TRITD5Av1G080350.7 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
TRITD5Av1G080350 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
TRITD5Av1G080350 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |