Description

Ensembl ID TRITD4Bv1G191410 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase subunit beta
Status Confidence Length 20285 bases Strand Minus strand
Position 4B : 634941481 - 634961765 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRITD4Bv1G191410 RNA_pol_Rpb2_1 PF04563 2.6e-41 1
TRITD4Bv1G191410 RNA_pol_Rpb2_1 PF04563 3.9e-34 2
TRITD4Bv1G191410 RNA_pol_Rpb2_3 PF04565 9.4e-19 3
TRITD4Bv1G191410 RNA_pol_Rpb2_3 PF04565 1.1e-18 4
TRITD4Bv1G191410 RNA_pol_Rpb2_7 PF04560 1e-29 5
TRITD4Bv1G191410 RNA_pol_Rpb2_7 PF04560 2.7e-29 6
TRITD4Bv1G191410 RNA_pol_Rpb2_7 PF04560 3.1e-29 7
TRITD4Bv1G191410 RNA_pol_Rpb2_2 PF04561 7e-11 8
TRITD4Bv1G191410 RNA_pol_Rpb2_2 PF04561 1.2e-07 9
TRITD4Bv1G191410 RNA_pol_Rpb2_6 PF00562 7.7e-112 10
TRITD4Bv1G191410 RNA_pol_Rpb2_6 PF00562 1e-111 11
TRITD4Bv1G191410 RNA_pol_Rpb2_6 PF00562 1.3e-94 12
TRITD4Bv1G191410 RNA_pol_Rpb2_4 PF04566 3e-17 13
TRITD4Bv1G191410 RNA_pol_Rpb2_4 PF04566 3.6e-17 14
TRITD4Bv1G191410 RNA_pol_Rpb2_5 PF04567 2.1e-09 15
TRITD4Bv1G191410 RNA_pol_Rpb2_5 PF04567 3.3e-09 16

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRITD4Bv1G191410.1 1332 443aa TRITD4Bv1G191410.1
- TRITD4Bv1G191410.2 3168 1055aa TRITD4Bv1G191410.2
- TRITD4Bv1G191410.3 3633 1210aa TRITD4Bv1G191410.3

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD4Bv1G191410

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD4Bv1G191410

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression