Description

Ensembl ID TRITD4Av1G074820 Gene ID Accession -
Symbol Alias - Full Name Nuclear cap-binding protein subunit 1
Status Confidence Length 17870 bases Strand Plus strand
Position 4A : 196985922 - 197003791 RNA binding domain RVT_2 , MIF4G_like , MIF4G_like_2 , MIF4G
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRITD4Av1G074820 RVT_2 PF07727 1.9e-10 1
TRITD4Av1G074820 MIF4G_like PF09088 1.8e-36 2
TRITD4Av1G074820 MIF4G_like PF09088 2.3e-36 3
TRITD4Av1G074820 MIF4G_like PF09088 2.4e-36 4
TRITD4Av1G074820 MIF4G_like PF09088 2.5e-36 5
TRITD4Av1G074820 MIF4G_like PF09088 2.5e-36 6
TRITD4Av1G074820 MIF4G_like PF09088 3e-36 7
TRITD4Av1G074820 MIF4G_like PF09088 4.1e-36 8
TRITD4Av1G074820 MIF4G_like_2 PF09090 5.8e-37 9
TRITD4Av1G074820 MIF4G_like_2 PF09090 6.3e-37 10
TRITD4Av1G074820 MIF4G_like_2 PF09090 6.3e-37 11
TRITD4Av1G074820 MIF4G_like_2 PF09090 6.4e-37 12
TRITD4Av1G074820 MIF4G_like_2 PF09090 6.8e-37 13
TRITD4Av1G074820 MIF4G_like_2 PF09090 7.8e-37 14
TRITD4Av1G074820 MIF4G_like_2 PF09090 1.1e-36 15
TRITD4Av1G074820 MIF4G_like_2 PF09090 2.1e-34 16
TRITD4Av1G074820 MIF4G_like_2 PF09090 2.8e-23 17
TRITD4Av1G074820 MIF4G_like_2 PF09090 6.6e-05 18
TRITD4Av1G074820 MIF4G PF02854 1.2e-25 19
TRITD4Av1G074820 MIF4G PF02854 1.6e-25 20
TRITD4Av1G074820 MIF4G PF02854 6.3e-25 21
TRITD4Av1G074820 MIF4G PF02854 2.2e-24 22
TRITD4Av1G074820 MIF4G PF02854 8.8e-20 23
TRITD4Av1G074820 MIF4G PF02854 2.1e-18 24
TRITD4Av1G074820 MIF4G PF02854 4.3e-10 25
TRITD4Av1G074820 MIF4G PF02854 3.5e-08 26

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRITD4Av1G074820.11 708 235aa TRITD4Av1G074820.11
- TRITD4Av1G074820.9 432 143aa TRITD4Av1G074820.9
- TRITD4Av1G074820.4 3195 1064aa TRITD4Av1G074820.4
- TRITD4Av1G074820.6 2535 844aa TRITD4Av1G074820.6
- TRITD4Av1G074820.5 2505 834aa TRITD4Av1G074820.5
- TRITD4Av1G074820.10 1056 351aa TRITD4Av1G074820.10
- TRITD4Av1G074820.2 2736 911aa TRITD4Av1G074820.2
- TRITD4Av1G074820.8 2175 724aa TRITD4Av1G074820.8
- TRITD4Av1G074820.3 2490 829aa TRITD4Av1G074820.3
- TRITD4Av1G074820.1 510 169aa TRITD4Av1G074820.1
- TRITD4Av1G074820.7 2493 830aa TRITD4Av1G074820.7

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD4Av1G074820

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD4Av1G074820

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression