Description

Ensembl ID TRITD4Av1G002400 Gene ID Accession -
Symbol Alias - Full Name Polyadenylate-binding protein-interacting protein 7
Status Confidence Length 4885 bases Strand Minus strand
Position 4A : 5031270 - 5036154 RNA binding domain PAM2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRITD4Av1G002400 PAM2 PF07145 2.7e-05 1
TRITD4Av1G002400 PAM2 PF07145 2.8e-05 2
TRITD4Av1G002400 PAM2 PF07145 3.5e-05 3
TRITD4Av1G002400 PAM2 PF07145 3.6e-05 4
TRITD4Av1G002400 PAM2 PF07145 3.6e-05 5
TRITD4Av1G002400 PAM2 PF07145 3.6e-05 6
TRITD4Av1G002400 PAM2 PF07145 3.7e-05 7
TRITD4Av1G002400 PAM2 PF07145 3.8e-05 8
TRITD4Av1G002400 PAM2 PF07145 5.3e-05 9
TRITD4Av1G002400 PAM2 PF07145 5.3e-05 10
TRITD4Av1G002400 PAM2 PF07145 5.3e-05 11
TRITD4Av1G002400 PAM2 PF07145 5.6e-05 12
TRITD4Av1G002400 PAM2 PF07145 5.6e-05 13
TRITD4Av1G002400 PAM2 PF07145 6e-05 14

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRITD4Av1G002400.10 1065 354aa TRITD4Av1G002400.10
- TRITD4Av1G002400.11 1107 368aa TRITD4Av1G002400.11
- TRITD4Av1G002400.12 1101 366aa TRITD4Av1G002400.12
- TRITD4Av1G002400.1 474 157aa TRITD4Av1G002400.1
- TRITD4Av1G002400.3 1527 508aa TRITD4Av1G002400.3
- TRITD4Av1G002400.7 1521 506aa TRITD4Av1G002400.7
- TRITD4Av1G002400.6 1524 507aa TRITD4Av1G002400.6
- TRITD4Av1G002400.15 687 228aa TRITD4Av1G002400.15
- TRITD4Av1G002400.16 678 225aa TRITD4Av1G002400.16
- TRITD4Av1G002400.4 1560 519aa TRITD4Av1G002400.4
- TRITD4Av1G002400.9 1143 380aa TRITD4Av1G002400.9
- TRITD4Av1G002400.13 1074 357aa TRITD4Av1G002400.13
- TRITD4Av1G002400.2 477 158aa TRITD4Av1G002400.2
- TRITD4Av1G002400.14 1077 358aa TRITD4Av1G002400.14
- TRITD4Av1G002400.8 1497 498aa TRITD4Av1G002400.8
- TRITD4Av1G002400.5 1524 507aa TRITD4Av1G002400.5

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD4Av1G002400

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD4Av1G002400

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression