Description

Ensembl ID TRITD3Bv1G040930 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase subunit beta
Status Confidence Length 3271 bases Strand Minus strand
Position 3B : 109043142 - 109046412 RNA binding domain RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRITD3Bv1G040930 RNA_pol_Rpb2_3 PF04565 1e-20 1
TRITD3Bv1G040930 RNA_pol_Rpb2_3 PF04565 1.1e-20 2
TRITD3Bv1G040930 RNA_pol_Rpb2_3 PF04565 1.1e-20 3
TRITD3Bv1G040930 RNA_pol_Rpb2_3 PF04565 1.1e-20 4
TRITD3Bv1G040930 RNA_pol_Rpb2_7 PF04560 8.7e-19 5
TRITD3Bv1G040930 RNA_pol_Rpb2_7 PF04560 9.4e-19 6
TRITD3Bv1G040930 RNA_pol_Rpb2_7 PF04560 9.6e-19 7
TRITD3Bv1G040930 RNA_pol_Rpb2_7 PF04560 9.7e-19 8
TRITD3Bv1G040930 RNA_pol_Rpb2_2 PF04561 3.3e-47 9
TRITD3Bv1G040930 RNA_pol_Rpb2_2 PF04561 3.4e-47 10
TRITD3Bv1G040930 RNA_pol_Rpb2_2 PF04561 3.4e-47 11
TRITD3Bv1G040930 RNA_pol_Rpb2_2 PF04561 8.2e-27 12
TRITD3Bv1G040930 RNA_pol_Rpb2_6 PF00562 1.6e-124 13
TRITD3Bv1G040930 RNA_pol_Rpb2_6 PF00562 1.9e-124 14
TRITD3Bv1G040930 RNA_pol_Rpb2_6 PF00562 2e-124 15
TRITD3Bv1G040930 RNA_pol_Rpb2_6 PF00562 2e-124 16

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRITD3Bv1G040930.3 3192 1063aa TRITD3Bv1G040930.3
- TRITD3Bv1G040930.4 3150 1049aa TRITD3Bv1G040930.4
- TRITD3Bv1G040930.1 2958 985aa TRITD3Bv1G040930.1
- TRITD3Bv1G040930.2 3195 1064aa TRITD3Bv1G040930.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD3Bv1G040930

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD3Bv1G040930

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression