Description

Ensembl ID TRITD2Bv1G243300 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase subunit beta
Status Confidence Length 7704 bases Strand Minus strand
Position 2B : 734742123 - 734749826 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRITD2Bv1G243300 RNA_pol_Rpb2_1 PF04563 8.2e-33 1
TRITD2Bv1G243300 RNA_pol_Rpb2_1 PF04563 8.3e-33 2
TRITD2Bv1G243300 RNA_pol_Rpb2_1 PF04563 9.3e-33 3
TRITD2Bv1G243300 RNA_pol_Rpb2_1 PF04563 1.2e-32 4
TRITD2Bv1G243300 RNA_pol_Rpb2_1 PF04563 1.3e-32 5
TRITD2Bv1G243300 RNA_pol_Rpb2_1 PF04563 1.3e-32 6
TRITD2Bv1G243300 RNA_pol_Rpb2_1 PF04563 1.3e-32 7
TRITD2Bv1G243300 RNA_pol_Rpb2_1 PF04563 3.2e-10 8
TRITD2Bv1G243300 RNA_pol_Rpb2_1 PF04563 8e-10 9
TRITD2Bv1G243300 RNA_pol_Rpb2_1 PF04563 8.1e-10 10
TRITD2Bv1G243300 RNA_pol_Rpb2_3 PF04565 2.5e-14 11
TRITD2Bv1G243300 RNA_pol_Rpb2_3 PF04565 2.7e-14 12
TRITD2Bv1G243300 RNA_pol_Rpb2_3 PF04565 2.8e-14 13
TRITD2Bv1G243300 RNA_pol_Rpb2_3 PF04565 3e-14 14
TRITD2Bv1G243300 RNA_pol_Rpb2_3 PF04565 7e-14 15
TRITD2Bv1G243300 RNA_pol_Rpb2_3 PF04565 7.1e-14 16
TRITD2Bv1G243300 RNA_pol_Rpb2_3 PF04565 7.2e-14 17
TRITD2Bv1G243300 RNA_pol_Rpb2_7 PF04560 9.7e-28 18
TRITD2Bv1G243300 RNA_pol_Rpb2_7 PF04560 4e-27 19
TRITD2Bv1G243300 RNA_pol_Rpb2_7 PF04560 4.1e-27 20
TRITD2Bv1G243300 RNA_pol_Rpb2_7 PF04560 4.1e-27 21
TRITD2Bv1G243300 RNA_pol_Rpb2_7 PF04560 2.3e-12 22
TRITD2Bv1G243300 RNA_pol_Rpb2_2 PF04561 2.4e-07 23
TRITD2Bv1G243300 RNA_pol_Rpb2_2 PF04561 2.4e-07 24
TRITD2Bv1G243300 RNA_pol_Rpb2_2 PF04561 2.7e-07 25
TRITD2Bv1G243300 RNA_pol_Rpb2_2 PF04561 3.8e-07 26
TRITD2Bv1G243300 RNA_pol_Rpb2_2 PF04561 4.2e-07 27
TRITD2Bv1G243300 RNA_pol_Rpb2_2 PF04561 4.3e-07 28
TRITD2Bv1G243300 RNA_pol_Rpb2_2 PF04561 4.3e-07 29
TRITD2Bv1G243300 RNA_pol_Rpb2_6 PF00562 2.4e-98 30
TRITD2Bv1G243300 RNA_pol_Rpb2_6 PF00562 2.5e-98 31
TRITD2Bv1G243300 RNA_pol_Rpb2_6 PF00562 7.7e-95 32
TRITD2Bv1G243300 RNA_pol_Rpb2_6 PF00562 7.9e-85 33
TRITD2Bv1G243300 RNA_pol_Rpb2_6 PF00562 2.2e-72 34
TRITD2Bv1G243300 RNA_pol_Rpb2_6 PF00562 1.1e-57 35
TRITD2Bv1G243300 RNA_pol_Rpb2_6 PF00562 6.4e-33 36
TRITD2Bv1G243300 RNA_pol_Rpb2_6 PF00562 6.6e-33 37
TRITD2Bv1G243300 RNA_pol_Rpb2_4 PF04566 2e-17 38
TRITD2Bv1G243300 RNA_pol_Rpb2_4 PF04566 2.1e-17 39
TRITD2Bv1G243300 RNA_pol_Rpb2_4 PF04566 2.1e-17 40
TRITD2Bv1G243300 RNA_pol_Rpb2_4 PF04566 2.4e-17 41
TRITD2Bv1G243300 RNA_pol_Rpb2_4 PF04566 2.6e-17 42
TRITD2Bv1G243300 RNA_pol_Rpb2_4 PF04566 2.7e-17 43
TRITD2Bv1G243300 RNA_pol_Rpb2_4 PF04566 2.8e-17 44
TRITD2Bv1G243300 RNA_pol_Rpb2_5 PF04567 3.5e-06 45
TRITD2Bv1G243300 RNA_pol_Rpb2_5 PF04567 3.5e-06 46
TRITD2Bv1G243300 RNA_pol_Rpb2_5 PF04567 4e-06 47
TRITD2Bv1G243300 RNA_pol_Rpb2_5 PF04567 4.8e-06 48
TRITD2Bv1G243300 RNA_pol_Rpb2_5 PF04567 5.1e-06 49
TRITD2Bv1G243300 RNA_pol_Rpb2_5 PF04567 5.1e-06 50
TRITD2Bv1G243300 RNA_pol_Rpb2_5 PF04567 5.1e-06 51

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRITD2Bv1G243300.6 3144 1047aa TRITD2Bv1G243300.6
- TRITD2Bv1G243300.4 3489 1162aa TRITD2Bv1G243300.4
- TRITD2Bv1G243300.1 786 261aa TRITD2Bv1G243300.1
- TRITD2Bv1G243300.7 2958 985aa TRITD2Bv1G243300.7
- TRITD2Bv1G243300.2 3708 1235aa TRITD2Bv1G243300.2
- TRITD2Bv1G243300.10 627 208aa TRITD2Bv1G243300.10
- TRITD2Bv1G243300.8 2949 982aa TRITD2Bv1G243300.8
- TRITD2Bv1G243300.11 666 221aa TRITD2Bv1G243300.11
- TRITD2Bv1G243300.9 630 209aa TRITD2Bv1G243300.9
- TRITD2Bv1G243300.3 3642 1213aa TRITD2Bv1G243300.3
- TRITD2Bv1G243300.5 3702 1233aa TRITD2Bv1G243300.5

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD2Bv1G243300

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD2Bv1G243300

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression