Description

Ensembl ID TRITD1Bv1G105900 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase subunit beta
Status Confidence Length 16494 bases Strand Plus strand
Position 1B : 315733221 - 315749714 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpa2_4 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRITD1Bv1G105900 RNA_pol_Rpb2_1 PF04563 6.3e-28 1
TRITD1Bv1G105900 RNA_pol_Rpb2_1 PF04563 1e-27 2
TRITD1Bv1G105900 RNA_pol_Rpb2_1 PF04563 1.5e-27 3
TRITD1Bv1G105900 RNA_pol_Rpb2_1 PF04563 1.6e-27 4
TRITD1Bv1G105900 RNA_pol_Rpb2_1 PF04563 1.6e-24 5
TRITD1Bv1G105900 RNA_pol_Rpa2_4 PF06883 6.8e-18 6
TRITD1Bv1G105900 RNA_pol_Rpa2_4 PF06883 8.8e-18 7
TRITD1Bv1G105900 RNA_pol_Rpa2_4 PF06883 9.5e-18 8
TRITD1Bv1G105900 RNA_pol_Rpa2_4 PF06883 1e-17 9
TRITD1Bv1G105900 RNA_pol_Rpa2_4 PF06883 1.1e-17 10
TRITD1Bv1G105900 RNA_pol_Rpa2_4 PF06883 1.1e-17 11
TRITD1Bv1G105900 RNA_pol_Rpb2_3 PF04565 1.9e-27 12
TRITD1Bv1G105900 RNA_pol_Rpb2_3 PF04565 2.6e-27 13
TRITD1Bv1G105900 RNA_pol_Rpb2_3 PF04565 2.9e-27 14
TRITD1Bv1G105900 RNA_pol_Rpb2_3 PF04565 3.2e-27 15
TRITD1Bv1G105900 RNA_pol_Rpb2_3 PF04565 3.4e-27 16
TRITD1Bv1G105900 RNA_pol_Rpb2_3 PF04565 3.5e-27 17
TRITD1Bv1G105900 RNA_pol_Rpb2_7 PF04560 6.5e-22 18
TRITD1Bv1G105900 RNA_pol_Rpb2_7 PF04560 8.4e-22 19
TRITD1Bv1G105900 RNA_pol_Rpb2_7 PF04560 9.1e-22 20
TRITD1Bv1G105900 RNA_pol_Rpb2_7 PF04560 9.3e-22 21
TRITD1Bv1G105900 RNA_pol_Rpb2_2 PF04561 2.2e-10 22
TRITD1Bv1G105900 RNA_pol_Rpb2_2 PF04561 3.3e-10 23
TRITD1Bv1G105900 RNA_pol_Rpb2_2 PF04561 3.4e-10 24
TRITD1Bv1G105900 RNA_pol_Rpb2_2 PF04561 4.7e-10 25
TRITD1Bv1G105900 RNA_pol_Rpb2_2 PF04561 3.9e-08 26
TRITD1Bv1G105900 RNA_pol_Rpb2_2 PF04561 6.6e-06 27
TRITD1Bv1G105900 RNA_pol_Rpb2_6 PF00562 4.1e-106 28
TRITD1Bv1G105900 RNA_pol_Rpb2_6 PF00562 5.1e-106 29
TRITD1Bv1G105900 RNA_pol_Rpb2_6 PF00562 6e-106 30
TRITD1Bv1G105900 RNA_pol_Rpb2_6 PF00562 6e-106 31
TRITD1Bv1G105900 RNA_pol_Rpb2_6 PF00562 1.8e-71 32
TRITD1Bv1G105900 RNA_pol_Rpb2_6 PF00562 1.4e-16 33

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRITD1Bv1G105900.6 3048 1015aa TRITD1Bv1G105900.6
- TRITD1Bv1G105900.5 3567 1188aa TRITD1Bv1G105900.5
- TRITD1Bv1G105900.2 2901 966aa TRITD1Bv1G105900.2
- TRITD1Bv1G105900.3 3549 1182aa TRITD1Bv1G105900.3
- TRITD1Bv1G105900.1 2325 774aa TRITD1Bv1G105900.1
- TRITD1Bv1G105900.4 3393 1130aa TRITD1Bv1G105900.4

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD1Bv1G105900

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRITD1Bv1G105900

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression