Description

Ensembl ID TRIDC3AG004580 Gene ID Accession -
Symbol Alias - Full Name Exosome complex component RRP41 homolog
Status Confidence Length 21214 bases Strand Plus strand
Position 3A : 21215992 - 21237205 RNA binding domain RNase_PH , RNase_PH_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRIDC3AG004580 RNase_PH PF01138 1.3e-37 1
TRIDC3AG004580 RNase_PH PF01138 9.7e-26 2
TRIDC3AG004580 RNase_PH PF01138 7.3e-25 3
TRIDC3AG004580 RNase_PH PF01138 2.1e-24 4
TRIDC3AG004580 RNase_PH PF01138 4e-21 5
TRIDC3AG004580 RNase_PH PF01138 5.6e-21 6
TRIDC3AG004580 RNase_PH PF01138 7.4e-19 7
TRIDC3AG004580 RNase_PH PF01138 2.6e-16 8
TRIDC3AG004580 RNase_PH PF01138 4.8e-16 9
TRIDC3AG004580 RNase_PH PF01138 7.3e-16 10
TRIDC3AG004580 RNase_PH PF01138 7.3e-16 11
TRIDC3AG004580 RNase_PH PF01138 7.4e-16 12
TRIDC3AG004580 RNase_PH_C PF03725 1.9e-07 13
TRIDC3AG004580 RNase_PH_C PF03725 1.9e-07 14
TRIDC3AG004580 RNase_PH_C PF03725 2e-07 15
TRIDC3AG004580 RNase_PH_C PF03725 2.1e-07 16
TRIDC3AG004580 RNase_PH_C PF03725 2.2e-07 17
TRIDC3AG004580 RNase_PH_C PF03725 2.5e-07 18
TRIDC3AG004580 RNase_PH_C PF03725 2.8e-07 19
TRIDC3AG004580 RNase_PH_C PF03725 4.1e-07 20
TRIDC3AG004580 RNase_PH_C PF03725 9.9e-05 21
TRIDC3AG004580 RNase_PH_C PF03725 0.00013 22

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRIDC3AG004580.12 581 193aa TRIDC3AG004580.12
- TRIDC3AG004580.3 494 164aa TRIDC3AG004580.3
- TRIDC3AG004580.4 590 195aa TRIDC3AG004580.4
- TRIDC3AG004580.11 559 111aa TRIDC3AG004580.11
- TRIDC3AG004580.5 1145 179aa TRIDC3AG004580.5
- TRIDC3AG004580.10 830 174aa TRIDC3AG004580.10
- TRIDC3AG004580.6 976 145aa TRIDC3AG004580.6
- TRIDC3AG004580.7 385 128aa TRIDC3AG004580.7
- TRIDC3AG004580.1 1159 242aa TRIDC3AG004580.1
- TRIDC3AG004580.8 1019 167aa TRIDC3AG004580.8
- TRIDC3AG004580.2 1600 179aa TRIDC3AG004580.2
- TRIDC3AG004580.9 603 177aa TRIDC3AG004580.9

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRIDC3AG004580

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRIDC3AG004580

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression