Description

Ensembl ID TRIDC2AG035000 Gene ID Accession -
Symbol Alias - Full Name Polyribonucleotide nucleotidyltransferase 1, chloroplastic
Status Confidence Length 23520 bases Strand Minus strand
Position 2A : 371601192 - 371624711 RNA binding domain RNase_PH , RNase_PH_C , PNPase , KH_1 , S1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRIDC2AG035000 RNase_PH PF01138 2.6e-40 1
TRIDC2AG035000 RNase_PH PF01138 2.6e-40 2
TRIDC2AG035000 RNase_PH PF01138 3.4e-40 3
TRIDC2AG035000 RNase_PH PF01138 3.4e-40 4
TRIDC2AG035000 RNase_PH PF01138 4e-40 5
TRIDC2AG035000 RNase_PH PF01138 4e-40 6
TRIDC2AG035000 RNase_PH PF01138 4.7e-40 7
TRIDC2AG035000 RNase_PH PF01138 4.7e-40 8
TRIDC2AG035000 RNase_PH PF01138 1e-39 9
TRIDC2AG035000 RNase_PH PF01138 1e-39 10
TRIDC2AG035000 RNase_PH PF01138 1.5e-39 11
TRIDC2AG035000 RNase_PH PF01138 1.5e-39 12
TRIDC2AG035000 RNase_PH PF01138 1.4e-22 13
TRIDC2AG035000 RNase_PH PF01138 2.1e-22 14
TRIDC2AG035000 RNase_PH PF01138 3.4e-15 15
TRIDC2AG035000 RNase_PH PF01138 1.3e-14 16
TRIDC2AG035000 RNase_PH PF01138 9.8e-12 17
TRIDC2AG035000 RNase_PH PF01138 6.9e-11 18
TRIDC2AG035000 RNase_PH PF01138 2.1e-10 19
TRIDC2AG035000 RNase_PH PF01138 2.6e-10 20
TRIDC2AG035000 RNase_PH PF01138 2.6e-10 21
TRIDC2AG035000 RNase_PH PF01138 2.7e-10 22
TRIDC2AG035000 RNase_PH PF01138 4.6e-10 23
TRIDC2AG035000 RNase_PH PF01138 6e-10 24
TRIDC2AG035000 RNase_PH PF01138 6e-10 25
TRIDC2AG035000 RNase_PH PF01138 6e-10 26
TRIDC2AG035000 RNase_PH_C PF03725 1.3e-19 27
TRIDC2AG035000 RNase_PH_C PF03725 1.3e-19 28
TRIDC2AG035000 RNase_PH_C PF03725 1.4e-19 29
TRIDC2AG035000 RNase_PH_C PF03725 1.5e-19 30
TRIDC2AG035000 RNase_PH_C PF03725 2.1e-19 31
TRIDC2AG035000 RNase_PH_C PF03725 2.5e-19 32
TRIDC2AG035000 RNase_PH_C PF03725 2.9e-19 33
TRIDC2AG035000 RNase_PH_C PF03725 2.6e-14 34
TRIDC2AG035000 RNase_PH_C PF03725 3.2e-14 35
TRIDC2AG035000 RNase_PH_C PF03725 4.5e-14 36
TRIDC2AG035000 RNase_PH_C PF03725 0.0011 37
TRIDC2AG035000 RNase_PH_C PF03725 0.0011 38
TRIDC2AG035000 RNase_PH_C PF03725 0.0011 39
TRIDC2AG035000 RNase_PH_C PF03725 0.0012 40
TRIDC2AG035000 RNase_PH_C PF03725 0.0015 41
TRIDC2AG035000 RNase_PH_C PF03725 0.0017 42
TRIDC2AG035000 PNPase PF03726 8.4e-06 43
TRIDC2AG035000 PNPase PF03726 9.7e-06 44
TRIDC2AG035000 PNPase PF03726 1.4e-05 45
TRIDC2AG035000 KH_1 PF00013 1.4e-07 46
TRIDC2AG035000 KH_1 PF00013 1.4e-07 47
TRIDC2AG035000 KH_1 PF00013 1.4e-07 48
TRIDC2AG035000 KH_1 PF00013 2e-07 49
TRIDC2AG035000 KH_1 PF00013 2.8e-07 50
TRIDC2AG035000 KH_1 PF00013 3.1e-07 51
TRIDC2AG035000 KH_1 PF00013 3.6e-07 52
TRIDC2AG035000 KH_1 PF00013 3.7e-07 53
TRIDC2AG035000 KH_1 PF00013 4.2e-07 54
TRIDC2AG035000 S1 PF00575 5e-11 55
TRIDC2AG035000 S1 PF00575 5e-11 56
TRIDC2AG035000 S1 PF00575 5e-11 57
TRIDC2AG035000 S1 PF00575 8e-11 58
TRIDC2AG035000 S1 PF00575 8.3e-11 59
TRIDC2AG035000 S1 PF00575 1e-10 60
TRIDC2AG035000 S1 PF00575 1.1e-10 61
TRIDC2AG035000 S1 PF00575 0.00035 62
TRIDC2AG035000 S1 PF00575 0.00055 63

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRIDC2AG035000.16 2152 717aa TRIDC2AG035000.16
- TRIDC2AG035000.9 2855 787aa TRIDC2AG035000.9
- TRIDC2AG035000.18 835 241aa TRIDC2AG035000.18
- TRIDC2AG035000.8 2860 405aa TRIDC2AG035000.8
- TRIDC2AG035000.1 2186 226aa TRIDC2AG035000.1
- TRIDC2AG035000.20 945 286aa TRIDC2AG035000.20
- TRIDC2AG035000.7 2108 316aa TRIDC2AG035000.7
- TRIDC2AG035000.17 974 148aa TRIDC2AG035000.17
- TRIDC2AG035000.11 2111 405aa TRIDC2AG035000.11
- TRIDC2AG035000.6 2829 561aa TRIDC2AG035000.6
- TRIDC2AG035000.10 2106 405aa TRIDC2AG035000.10
- TRIDC2AG035000.2 2243 226aa TRIDC2AG035000.2
- TRIDC2AG035000.5 2916 590aa TRIDC2AG035000.5
- TRIDC2AG035000.19 920 260aa TRIDC2AG035000.19
- TRIDC2AG035000.15 2418 805aa TRIDC2AG035000.15
- TRIDC2AG035000.13 1804 262aa TRIDC2AG035000.13
- TRIDC2AG035000.4 1785 224aa TRIDC2AG035000.4
- TRIDC2AG035000.3 2983 653aa TRIDC2AG035000.3
- TRIDC2AG035000.14 2682 893aa TRIDC2AG035000.14
- TRIDC2AG035000.12 2070 207aa TRIDC2AG035000.12

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRIDC2AG035000

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRIDC2AG035000

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression