Description

Ensembl ID TRIDC2AG031070 Gene ID Accession -
Symbol Alias - Full Name ATP-dependent DNA helicase SRS2-like protein At4g25120
Status Confidence Length 31790 bases Strand Minus strand
Position 2A : 266521214 - 266553003 RNA binding domain UvrD-helicase
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRIDC2AG031070 UvrD-helicase PF00580 2.7e-61 1
TRIDC2AG031070 UvrD-helicase PF00580 2.7e-61 2
TRIDC2AG031070 UvrD-helicase PF00580 3.2e-61 3
TRIDC2AG031070 UvrD-helicase PF00580 4.1e-61 4
TRIDC2AG031070 UvrD-helicase PF00580 1.8e-53 5
TRIDC2AG031070 UvrD-helicase PF00580 3.8e-47 6
TRIDC2AG031070 UvrD-helicase PF00580 8.9e-30 7
TRIDC2AG031070 UvrD-helicase PF00580 4e-29 8
TRIDC2AG031070 UvrD-helicase PF00580 4e-29 9
TRIDC2AG031070 UvrD-helicase PF00580 9.5e-28 10
TRIDC2AG031070 UvrD-helicase PF00580 6.4e-25 11
TRIDC2AG031070 UvrD-helicase PF00580 9.8e-16 12
TRIDC2AG031070 UvrD-helicase PF00580 1.9e-08 13

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRIDC2AG031070.14 1760 573aa TRIDC2AG031070.14
- TRIDC2AG031070.8 1500 400aa TRIDC2AG031070.8
- TRIDC2AG031070.15 1755 413aa TRIDC2AG031070.15
- TRIDC2AG031070.11 1506 501aa TRIDC2AG031070.11
- TRIDC2AG031070.9 2743 462aa TRIDC2AG031070.9
- TRIDC2AG031070.16 1297 432aa TRIDC2AG031070.16
- TRIDC2AG031070.1 3915 905aa TRIDC2AG031070.1
- TRIDC2AG031070.13 2309 462aa TRIDC2AG031070.13
- TRIDC2AG031070.2 4020 1194aa TRIDC2AG031070.2
- TRIDC2AG031070.10 1063 354aa TRIDC2AG031070.10
- TRIDC2AG031070.3 4058 972aa TRIDC2AG031070.3
- TRIDC2AG031070.6 3821 645aa TRIDC2AG031070.6
- TRIDC2AG031070.4 3723 903aa TRIDC2AG031070.4
- TRIDC2AG031070.7 1129 233aa TRIDC2AG031070.7
- TRIDC2AG031070.5 1264 233aa TRIDC2AG031070.5
- TRIDC2AG031070.12 1174 391aa TRIDC2AG031070.12

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRIDC2AG031070

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRIDC2AG031070

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression