Description

Ensembl ID TRIDC1BG044550 Gene ID Accession -
Symbol Alias - Full Name Cold shock protein 1
Status Confidence Length 1514 bases Strand Plus strand
Position 1B : 485385838 - 485387351 RNA binding domain CSD , OB_RNB , S1 , zf-CCHC
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRIDC1BG044550 CSD PF00313 3.6e-26 1
TRIDC1BG044550 CSD PF00313 1.5e-25 2
TRIDC1BG044550 CSD PF00313 1.6e-25 3
TRIDC1BG044550 CSD PF00313 1.7e-25 4
TRIDC1BG044550 CSD PF00313 2.6e-25 5
TRIDC1BG044550 OB_RNB PF08206 0.00013 6
TRIDC1BG044550 S1 PF00575 0.0012 7
TRIDC1BG044550 zf-CCHC PF00098 3.4e-16 8
TRIDC1BG044550 zf-CCHC PF00098 3.4e-16 9
TRIDC1BG044550 zf-CCHC PF00098 3.3e-15 10
TRIDC1BG044550 zf-CCHC PF00098 3.3e-15 11
TRIDC1BG044550 zf-CCHC PF00098 3.7e-15 12
TRIDC1BG044550 zf-CCHC PF00098 3.7e-15 13
TRIDC1BG044550 zf-CCHC PF00098 6.5e-15 14
TRIDC1BG044550 zf-CCHC PF00098 6.5e-15 15
TRIDC1BG044550 zf-CCHC PF00098 5.4e-08 16

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRIDC1BG044550.3 582 194aa TRIDC1BG044550.3
- TRIDC1BG044550.6 321 86aa TRIDC1BG044550.6
- TRIDC1BG044550.5 594 197aa TRIDC1BG044550.5
- TRIDC1BG044550.7 526 45aa TRIDC1BG044550.7
- TRIDC1BG044550.2 753 250aa TRIDC1BG044550.2
- TRIDC1BG044550.1 314 104aa TRIDC1BG044550.1
- TRIDC1BG044550.4 573 190aa TRIDC1BG044550.4

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRIDC1BG044550

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRIDC1BG044550

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression