Description

Ensembl ID TRIDC1AG028170 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 8040 bases Strand Minus strand
Position 1A : 338744479 - 338752518 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TRIDC1AG028170 RRM_1 PF00076 3.9e-11 1
TRIDC1AG028170 RRM_1 PF00076 1.2e-10 2
TRIDC1AG028170 RRM_1 PF00076 1.6e-10 3
TRIDC1AG028170 RRM_1 PF00076 7.1e-10 4
TRIDC1AG028170 RRM_1 PF00076 7.1e-10 5
TRIDC1AG028170 Surp PF01805 4.6e-14 6
TRIDC1AG028170 Surp PF01805 5.8e-14 7
TRIDC1AG028170 Surp PF01805 6.7e-14 8
TRIDC1AG028170 Surp PF01805 6.7e-14 9
TRIDC1AG028170 Surp PF01805 8.6e-14 10
TRIDC1AG028170 Surp PF01805 8.9e-14 11
TRIDC1AG028170 Surp PF01805 1.6e-13 12
TRIDC1AG028170 Surp PF01805 1.6e-13 13
TRIDC1AG028170 cwf21 PF08312 1.9e-07 14
TRIDC1AG028170 cwf21 PF08312 1.4e-06 15
TRIDC1AG028170 cwf21 PF08312 1.4e-06 16
TRIDC1AG028170 CID PF04818 1.2e-07 17
TRIDC1AG028170 CID PF04818 3.6e-07 18
TRIDC1AG028170 CID PF04818 3.6e-07 19

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TRIDC1AG028170.6 1999 269aa TRIDC1AG028170.6
- TRIDC1AG028170.13 632 154aa TRIDC1AG028170.13
- TRIDC1AG028170.9 1168 180aa TRIDC1AG028170.9
- TRIDC1AG028170.1 2847 948aa TRIDC1AG028170.1
- TRIDC1AG028170.12 2049 128aa TRIDC1AG028170.12
- TRIDC1AG028170.8 918 254aa TRIDC1AG028170.8
- TRIDC1AG028170.11 760 198aa TRIDC1AG028170.11
- TRIDC1AG028170.10 438 146aa TRIDC1AG028170.10
- TRIDC1AG028170.3 2742 507aa TRIDC1AG028170.3
- TRIDC1AG028170.2 2850 949aa TRIDC1AG028170.2
- TRIDC1AG028170.4 1318 312aa TRIDC1AG028170.4
- TRIDC1AG028170.5 1953 269aa TRIDC1AG028170.5
- TRIDC1AG028170.7 878 239aa TRIDC1AG028170.7

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRIDC1AG028170

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TRIDC1AG028170

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression