RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	TCM_027755	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial
Status	Confidence	Length	5644 bases	Strand	Minus strand
Position	6 : 6941379 - 6947022	RNA binding domain	tRNA-synt_1b
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
EOY26276	tRNA-synt_1b	PF00579	5.9e-66	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	EOY26276	1885	386aa	EOY26276

Gene Model

Click here to download TCM_027755's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download TCM_027755's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TCM_027755

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TCM_027755

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression