RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	TCM_021435	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Zinc knuckle (CCHC-type) family protein
Status	Confidence	Length	6274 bases	Strand	Plus strand
Position	4 : 33058964 - 33065237	RNA binding domain	NFACT-R_1 , zf-CCHC
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
EOY06825	NFACT-R_1	PF05670	3.3e-34	1
EOY06825	zf-CCHC	PF00098	1e-05	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	EOY06825	3799	1112aa	EOY06825

Gene Model

Click here to download TCM_021435's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download TCM_021435's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TCM_021435

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TCM_021435

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression